LOCUS BG070446 808 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087D11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087D11 3', mRNA sequence. ACCESSION BG070446 VERSION BG070446.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 808) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070446.1. Other_ESTs: H3087D11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: D column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..808 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087D11-3" /db_xref="taxon:10090" /clone="H3087D11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 221 a 146 c 203 g 238 t ORIGIN 1 ggagaacacc tatgcacaca tttgttttat tttatctttc acacaagtta tcatgtagcc 61 caagctgacc tctaatttgc attgtaactg aggtcagctt gagctagtca gtgccctgca 121 gaagcccctc tgtgctgaag ttactcaacc tgctttgcag aactatattt tcagctctca 181 gcaaaatgag aaacaaattg ttcaatatct gagactaagc acactctgta attgatggtg 241 aagacatcat tgggctttgt tttcttctgg tgaggaaagc aaaagccttt caggagtctc 301 agctcttgcc tgtttatgtg cttgggttag ctgaggcact agggcacagt gcctgctttc 361 aaagacacca tgtgacaaag ttgctcaggt gaggaaggat aaagaggtat tgtggctata 421 agggtgagtt ttctttctac gttaaagatt attgggggct tgatgtgggg aagctagtag 481 ggtcatacct aatctgggaa tgatgtctga actgcatccc gcaggtctgt aactctgtgg 541 gaactgtatg ttttgtctgc atgcacttat atgcatcaca tacataggag gtcagaagtg 601 ttcataggat ggaatggaag tggaattaca cagagcttga tggatgagag cctactggtt 661 ggtaccagga aagaattcta agttgtctaa gagtgtagca catgctctaa tctgttgggc 721 cacatctcct gcctctaagg tgcagaattt tgagataggg tacacagctg aaggacaaac 781 agtagtgtat tagtagaaaa agagtttg //