LOCUS BG070427 631 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087C03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087C03 3', mRNA sequence. ACCESSION BG070427 VERSION BG070427.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 631) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070427.1. Other_ESTs: H3087C03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: C column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..631 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087C03-3" /db_xref="taxon:10090" /clone="H3087C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 102 c 100 g 226 t ORIGIN 1 aagaacagct tttaatttct actttttaca agcatggata ataatacctc taatagaacg 61 tgttaatatc catgtaaatg gctggaggta cagcttattg acagagcatt tgcttagtat 121 gaaactgtgg ccataggctc aattccaaca acagtatctc aactaaaaca taaaaatatt 181 gtatcatgtc actccaaact aaatagcctt ttaaacagta tagcataata atttcggtaa 241 aaaatataat cacacaattt aatgtttgct gattatttat ttattcattt gagtgtttct 301 aagtgggtta tcccatttaa tcttcacaac tttaaattcc taaaattagc tccaattatt 361 ttatggctct gattagcatg aaacaattgt gtacattcgc aagatacagt tcgacccatt 421 accatgtgta cagtgtgcca atcaaatcaa ggtgtggtat ccatctcctt gtttcctgtg 481 attgaggcct ttgagcttat attaaagctc ttctcattta tataatgttg aaaataaaat 541 attaggttat tgtgagatat tgtgatgtag aatagtaaag tatatttctt ctactgatct 601 gtggtttggt tagccagcat ctgtctagga t //