LOCUS BG070409 797 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087A08 3', mRNA sequence. ACCESSION BG070409 VERSION BG070409.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 797) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070409.1. Other_ESTs: H3087A08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..797 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087A08-3" /db_xref="taxon:10090" /clone="H3087A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 275 a 168 c 158 g 196 t ORIGIN 1 gaaacctgaa accccatccc tcctccaata agatcacacc tcctaatcct tcccaaacag 61 ttctaccaac tagggatgaa gtattcaaat atatgagcct atgggagata tttttattca 121 aaccatatta ctatattcaa acacctcaca ccacacacac atacacacac acacacacac 181 acacacacac acacagtatg taggtgtgaa aatttttact ggttatcttt gtattgctgg 241 gataaaacac agaagtgact tataaaagaa ggagtttatt tttgttcatg gttccaatgg 301 gacaagaatc catcatggct acaaaatgta gcaacaagca ctgggcacag agactagagc 361 aggaaactga gacctcacct ccttagccac aagtgtgaag cagagaatga accagaaatg 421 gtgaaaggct ttaaacactc aaagttctcc ttcagcagca ttcttcctcc aacaaggcca 481 tatagctcca agacctccct aagcaaagcc atcaaatggg aaccaaggtt caaatgcctg 541 ggggacattt gggggggact tttttttaac taccataaaa ttgattaata tcaagctgga 601 aattatgaaa gagcttcatt tgaggcctta ggagttgcag atcaggagac acggatttgg 661 caaaatgaag gtgtatgtca tgaagagaac aaaggtctca ggtttaggaa agagcaaaat 721 tctatgctgg ctattatggg ctagggtaga agtctatgca tctatagctg atgagttaaa 781 ttgagatgac agctgca //