LOCUS BG070399 746 bp mRNA linear EST 12-MAY-2010
DEFINITION H3086H10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3086H10 3', mRNA sequence.
ACCESSION BG070399
VERSION BG070399.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 746)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG070399.1.
Other_ESTs: H3086H10-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3086 row: H column: 10
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..746
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3086H10-3"
/db_xref="taxon:10090"
/clone="H3086H10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 181 a 173 c 140 g 252 t
ORIGIN
1 cgagacaggg tttctctgta tagccctgga tgtcctggaa ctcactttgt agaccaggat
61 ggcctcgaac tcagaaatcc gcctgcctct gcctcccgag tgctgggatt aaaggggtac
121 gccaccacac ccggctacac cttttacttc taattatttg tatctgtaat taagcacttc
181 tcatgggctt catcaagcac aatgacatgc tcacaaactc cagacatctt taagtgtgcc
241 tccatttgcc aacagatgtt tatgttcttt gtcttctgga gaactgggtc tttattaatc
301 tgaggtcttg ccctagcttc tatcctattc tgctgaccca tataacctct acattctaaa
361 tacaactgtg tatatccaca gtgatctata gtcttataac actcataaaa ctggcttgtg
421 tgttgaaatc acagatggcc ttatgagtta tagagaggac cattttcaat cagggccttt
481 ggaagatcct tgcatcacac agcctgaaat ctggtttttg tggggtttgt tcgtttgttt
541 tgtttgacaa ggtctcatgt agtccagact gaccttcaaa tctttgggat aactttgaat
601 ttctgatctt cctgcttctc ccatttaatt gtgggcatgt accatcacag tttatgaaat
661 attaggattt aaatccttgc atgtgctagg ttagcactga actataccta caacctagat
721 ccttggttgt cttcattcct tcatta
//