LOCUS BG070395 722 bp mRNA linear EST 12-MAY-2010 DEFINITION H3086H06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3086H06 3', mRNA sequence. ACCESSION BG070395 VERSION BG070395.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 722) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070395.1. Other_ESTs: H3086H06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3086 row: H column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..722 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3086H06-3" /db_xref="taxon:10090" /clone="H3086H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 270 a 110 c 137 g 205 t ORIGIN 1 tttggttatg tcctcatctt gaaggttttg gtatctcaga agaggatgct gtgatgaatg 61 cagtctgaag atgagatctt aactgagcaa tacagccagt ttctaaatct gtggccaatt 121 ggcatgtaaa tggaaaactc atgaaatttt tggtagcaga gaaatgtagc gaaatctcca 181 gaggattttg ctacatgaaa atgctaatcc aggaaattac aaattaaatc attccatgtg 241 taccacattc tgtaaaatac accatagagg tggaaaccac aacagtcctt gctagggatt 301 atgaagtgat tagcagtcgg aataaaatag atgtctataa agacagcaaa ggagtatttc 361 accactggac caatggaggt gcattcatta tggcattgta caaatttata aattaggaaa 421 tttggaagaa cttattacca agtttatata aatatatcac tttatcgaca caaaaaggca 481 taggtaaaat ctatttttat atctcaaaaa tcacactgaa cactcagagg gtttctggta 541 ggatgagcag agaatgagtt tcagcaaata tgcacagaac gtttatatga gagcttcagt 601 tatttaaatc tgatcagaca aaatcaaacc agatagaacg agtactccaa atatttgtaa 661 ataattaaga aaatggttaa aatataatga tatcctaatc tactgagtag caaagaccac 721 aa //