LOCUS BG070357 684 bp mRNA linear EST 12-MAY-2010 DEFINITION H3086E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3086E03 3', mRNA sequence. ACCESSION BG070357 VERSION BG070357.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 684) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070357.1. Other_ESTs: H3086E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3086 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..684 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3086E03-3" /db_xref="taxon:10090" /clone="H3086E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 236 a 139 c 99 g 210 t ORIGIN 1 catatttctg agctacattt taattatgta tatacttata cagatatttc taatacagac 61 tttaagtata gaaaattaag atgtcagagc atacgtaatg atctgaccaa agtaaaaggt 121 aacatctttt cagcatctct tgttgttttt gaaaccccca attttaaaaa gctaagacct 181 gttatttaaa aagcttttcc cattatgttt ttgcttatca cacaaagtag gctgagaatg 241 tgacacatct caacacaagt ctagacatga cagaaagtga caagtgagtt aacactgttt 301 ctcacaacag cagtgctgac catgtaaact gtgctcagtg actctcttaa ccatcctcgt 361 acacaaaacc aaccaactta gctactgctc caatgccagc aaacagcaat gccaactcat 421 ctaagactcc tccagctaga gttttaaata atacagttat attcaattta tttatggctg 481 aaagaatcaa gtatattatg atgaatgcag atagctttct gcatgtaaat agccttcatt 541 aagccactaa attcaataca tacatgagac tgcatattat gtcactcatt gagactgact 601 aaagtaaaag cctgacagca accataaaac tgccttctaa atgttcaact ctgtgagtta 661 gtggaatgct tacttcaatc cttt //