LOCUS BG070355 769 bp mRNA linear EST 12-MAY-2010 DEFINITION H3086E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3086E01 3', mRNA sequence. ACCESSION BG070355 VERSION BG070355.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 769) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070355.1. Other_ESTs: H3086E01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3086 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..769 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3086E01-3" /db_xref="taxon:10090" /clone="H3086E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 227 a 168 c 146 g 228 t ORIGIN 1 gtaagggaca aggaagtttg actttattga tattcagagt ttttatggaa atagaaccct 61 acatccctga gaatcatgat ccacctggct acattacacc cttatccttt tacttcatgt 121 ttttagttga tttttatatt agcatttact gatatctctg aacactggtc ttcttttctt 181 tatttaaaca caacaaaata aaatataata agaaaaaaaa aacaaaaacc atcatattga 241 aattggacaa gatcagctaa cagaaaaata aaagatcccc gacagaaggg acaagactca 301 ctcattcaca catttagggg tctttaatgg tgctaaactg aaagctacag tatccacaga 361 ggatttgctg cagaccctga caggccctgc agctgctatt ccagtctctg agttcatatg 421 agctttgttc agttgttccg tagggtcctg ttttcctggt gtctttcgtc ccctctgttt 481 gaaagccgtg aaagtggcct tggtgagcac tggaaattaa tggtggattc ccaacttaaa 541 ataggcacca ccgaaatggc ttcaccgaat cttcctgcac ggcatcggca tccccgtgaa 601 cccaggagca gtggtgttca gataccacag accatcactt tacacggaga gggcccagat 661 ttgttccagt tctgaagatc cttagaggaa ttttagaacc tctgcgggat ttcccattaa 721 acactgcact gattagcacc tagccttaat aagtattcat ttgtttgtt //