LOCUS BG070305 645 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085H07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085H07 3', mRNA sequence. ACCESSION BG070305 VERSION BG070305.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 645) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070305.1. Other_ESTs: H3085H07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: H column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..645 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085H07-3" /db_xref="taxon:10090" /clone="H3085H07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 247 a 117 c 112 g 169 t ORIGIN 1 acatgtttca aagtctttat ggaaaaaaaa atgatacagg tttaacaagt tctaaaatgc 61 caatgtgtca actccacact gcagaaccta catgatgata cagaaagtca tagcaaacgt 121 ggtcaataag gggcaagagg gccacgatga caaaccatgt catccctggg gtgacaatct 181 ttcatatacc tcagagatcc caaagattaa aattcaggag gctgtgaatg gtagacccag 241 aagtgcctac catgtaacac caggttggtt tctgatccac atgtaaaaat aaacacaatt 301 ctcaaaaata ctgaggagcc atgccttaaa actttgtagg acataagggc tgctcaggtt 361 tttctcattt tacttgaaca aaaatattta attttttgca catagagaat aagaggtaat 421 cattagcatg aaaacagaga aaaggatttt caacattatg cataaagaaa gcaaaattac 481 aaataccagt ctactcacat gaaaatcctt aatgtttatg cttctgagtg cttatcagtg 541 tgcagtaaaa aagacaacaa aaaaggcagc ttaggaattc tccagtgttt ccaagaagca 601 ctttataaaa tgtatataca caaaaccttt aatcatactg taaaa //