LOCUS BG070257 727 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085D05 3', mRNA sequence. ACCESSION BG070257 VERSION BG070257.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 727) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070257.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..727 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085D05-3" /db_xref="taxon:10090" /clone="H3085D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 156 c 149 g 190 t ORIGIN 1 aatacaatat ctagatgtat aaggacaacc aaatagggaa accccacaaa ctgatgtttt 61 aacaatgttt tacaaactgt tgataaagat tgtatgcttg gatttaaaag aaccccaata 121 gatgaataaa tagtctcaca ttaaatcttg tagattaacc aattgctctt agtataaaac 181 caatacatca tagtgggagg gatacaccat tgcccttggc gctcctgtct ccatctctca 241 ttggtcgtct cgtaagtggg aaaataaaat tgaatttata ttagcaaatg aaagtgcaag 301 tttatacagc agggctgagc agcaggagtg aagaatgata agacaggaga ggctgacagt 361 ccctctacac caaggacatc tatgtcagtc cttgtccccc aacgtcaacg tgacatcact 421 tatttttcat tgctctgaaa cgagcagaac caaattcttt gatctaaagg aatattaaat 481 atttatttcc cccacatcat ttgtgatcac gtaaggcaaa gggagagaag tcctaccctc 541 actgtgggtg gcagcagcat acaacttcag agcgcctcac agggacattc acgctcccac 601 ggcggcatgc ggagacgtct gctagagcat gtctgcaccc tgccttgttt taatttatct 661 agctgaaaaa aagcttttat aaacatatca cttaagagga cggctgagcc aggcggggtt 721 ggcgcac //