LOCUS BG070256 617 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085D04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085D04 3', mRNA sequence. ACCESSION BG070256 VERSION BG070256.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 617) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070256.1. Other_ESTs: H3085D04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: D column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..617 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085D04-3" /db_xref="taxon:10090" /clone="H3085D04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 109 c 99 g 223 t ORIGIN 1 gagacagggt ttctctgtgt agcctggctc ttctggaact cactctgtag accaggctgg 61 cctcaaactc caaaatcctc ctgcctccgc ctcccaagtg ctgggattaa aggtgtgcac 121 caccacgccc aggtgattgt ttttttaaga gaaaagttag ttgggaagaa gatatggatt 181 gaaaaaggtg gagatatgag gtgggtgtgc atatcaacaa tatatactga attcatgtat 241 gaaatgttca aagaataaaa aacaaattca tctactcaga aaccactttc aaattctttg 301 tttttatagt tttaatatag agtaaaattc gtgtatacat tattgcatta tgtatgcaac 361 tattttatca cacaattttg caactagtta tcagtttgta aataacatac gttgtaaagc 421 cttcatctag ttttggttgt atgataatgg taatctttta gcttttaact tttcactcta 481 cattcctatc ccataatgaa aaaaatttaa gttaaagtca catttttctt acatgtttgt 541 taaaactcac caatgatagt atctgactta aatgctttct ttttttgttt ttctctttct 601 cttctcacaa acatttt //