LOCUS BG070252 836 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085C12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085C12 3', mRNA sequence. ACCESSION BG070252 VERSION BG070252.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 836) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070252.1. Other_ESTs: H3085C12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: C column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..836 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085C12-3" /db_xref="taxon:10090" /clone="H3085C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 201 a 207 c 181 g 247 t ORIGIN 1 ctcttcactt tacaaacagc ccctaagcac ttaggacacc acagtatgta tatatgtaac 61 tataaagttc atttccatgc ttattacaga aaaataacta tcagaaatgt cagtctatca 121 ttatcaactg atacacatcc aactcactat agaagggaaa agaaaacaaa acaaaagaaa 181 aaaaaactaa agtaattaaa gcttacaatt ccattttttt tccacttttt ccccctgctt 241 gtttgaactt tttgggtggt ttatctgtgc ttcgctggct gccaggtgat tcccggttaa 301 tggcctccaa gcagattgga gaggaagcct gaggatttct tactttgctg ggcttctgcc 361 ccttggtctt gtgttagtcc cagctcactc tcaatttgat ctagctctgc ctggtcaagt 421 agttcaaagt catccccctc ctcagtgtct gtgtcctctc ccgcagtggg cgccacctga 481 gtgagtgcct gccgggctcc ttctagctgg tctttgatgg cagccgtcat ggcgctgtga 541 tgacatcccc agccaggttg ctcatcaagt gaagggcttg gtcgctcttg agaggaagtg 601 agaggccagc tgccgactgc cgttctttgc ttggtctgtg agcactatcc aactgctgct 661 tctttctctt gagctctgtg ggtaagccca ggcttaattc atcttcatca tttgttcccg 721 tcccattttc cagagatgga aaatctgaaa gatctcgaga gaaaacttcc tcactgggcc 781 ggtcaagatc gtcagaagtg tctgtctgcg gagtgtaccc ctctgaaagg ttgaag //