LOCUS BG070238 815 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085B09 3', mRNA sequence. ACCESSION BG070238 VERSION BG070238.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 815) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070238.1. Other_ESTs: H3085B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..815 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085B09-3" /db_xref="taxon:10090" /clone="H3085B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 246 a 203 c 123 g 243 t ORIGIN 1 aaatagccag cttgcatttt agacgattta ttgcataaaa tagggtatgt atctgaatat 61 atttcatgct actgtggaaa aaaagtctga actgctgacc ctgctgggaa aaagactagc 121 tgtgcgtgac actccgtaca cagtgtaagc atctcttttc accaacctct ccaaatacct 181 cagtagtaca cggcttctgg ctgcaaattc ttgcaacata accactttta aaaatgtaca 241 ttaacttggt aaacaccagg gtacattgcc aaataccttt cttgtatgac tctgtggaca 301 ctcaagagtg tttccttggg catggtagcc atccataggt gacaagacaa catatagaac 361 ttcacacgac acggttccct catccatatg ttaaacattg agatagtgca ctcttaaaac 421 ataccatcac aacacaaatc acttcctctc actcgtctaa cttctccaac tttaaaacct 481 tggcacacca aacaggagtt ttgactcata tttttaaaac aaaataagtt tcacaccttt 541 ggagaaaaag caaactggct gattcttccc catgataata tataataatt cttccctctt 601 tattcagtta attataaaac aggccactgt ggcctcattt atccgcagtc tccttttgga 661 atcaaatatg tcaaaaatac ctctgtgggt catactttca tgatgtcttc aaagcagcct 721 tttttagttt tctctgcaca ccacttagcc aagatcatac catctctagc ccttgtctcc 781 atccaccccc tgccccaagg tgaacactgt ctgtg //