LOCUS BG070208 583 bp mRNA linear EST 12-MAY-2010 DEFINITION H3084H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3084H03 3', mRNA sequence. ACCESSION BG070208 VERSION BG070208.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 583) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070208.1. Other_ESTs: H3084H03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3084 row: H column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..583 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3084H03-3" /db_xref="taxon:10090" /clone="H3084H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 165 a 117 c 132 g 169 t ORIGIN 1 gtttttaaga tttcctttac ttctttccct gtgtgtctat aagccatatg tgtgcaggtg 61 tttgaggaag tcaggaagag tgttgaattc cctgtagctt ccagggatgg atgctgggaa 121 ttgatctctg gtcctctcga agacaagcag gcactcttaa cacttctgca gcccatgaag 181 aactgaggga cacaggaaga taaatgactt agcccaggtt aagcaatcca gctccacaat 241 cacatccgga agcgtggtgt taccagacca tgtttccacc tgtggtcact tgaagttgag 301 aagaatccca gatgagttat aatggactat ctactccatt gttccattat ctcagtagct 361 tcaaggactc ctcctcagaa cgtggagtgc aggccagtag agaaatcaga agatataggt 421 tccatcctgt gtaaccttgg gtcattcact tcattcatct ctctgggatt gtcttgctct 481 gttggggaaa agaaagagaa ataaataccc acttcatgga attttcaatt aaaaaaaata 541 tatattgcat gggataaaat gtttagaatg gaatctgctg tgg //