LOCUS BG070174 734 bp mRNA linear EST 12-MAY-2010 DEFINITION H3084E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3084E05 3', mRNA sequence. ACCESSION BG070174 VERSION BG070174.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 734) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070174.1. Other_ESTs: H3084E05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3084 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..734 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3084E05-3" /db_xref="taxon:10090" /clone="H3084E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 185 a 170 c 185 g 194 t ORIGIN 1 aatgcaactg ctgtttatta gaaagagcag aggagacaga gtgggggccc tcaggacagg 61 atggaacaag actgacagtg agctaagagt gtgggcccct cagggcaaga tggctcagca 121 gcagcgagct ctggctcagc ataagcactt gttaccccac ttggccatct tgttattgat 181 tggcatcttg aagaagcggt cagactgcag gaatgcagca atcttctcca aagcctcaaa 241 acggcacatg aaagccttca ggtttgggaa ctcatccaga cacttgggct caaatatacg 301 gttctgatcc aagacatcat aggtgagaaa atccacaaag gtcagctttt ctcctgcaaa 361 ccatgtgaat ttccccagga acaatgagaa ttgtttcagc tgtgcaggta gctgttccaa 421 gtactgaggc ttcaggtttt cgtggttaga attgtagcag aggcgaacca gctgcatgcg 481 gaagtccatg atctggttct ccatgatgtc tactcgtatc ttttcttctt cagtgtcacc 541 acacatgttg tgcttgcgtg cgatgtatct caggatggcg ttactctggg tgatcttgtt 601 cttcccgtcc atgaggtagg gcaggttagg aaagtccaga tctagcttga atttcacgtc 661 cagccattgg cttctatcat agtcaggagc ttccccacag atgtaccgtt tctcctcata 721 gctggtatca gtaa //