LOCUS BG070086 622 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082F03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082F03 3', mRNA sequence. ACCESSION BG070086 VERSION BG070086.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 622) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070086.1. Other_ESTs: H3082F03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: F column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..622 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082F03-3" /db_xref="taxon:10090" /clone="H3082F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 165 c 176 g 135 t ORIGIN 1 ctgaagtgtg tctctttatt ttaacagcct tgcaggatca ggtaacagta cagggttcag 61 aggtccatta gcccaggctc gggcaatagc tcctgtctga ctatccagag cactgagccc 121 tcgacaaagc ccaggtcaga catcagcccc aggggtaatc cagatcctgg gcataagtag 181 gacagtcaaa acctcctcca gtgtaaccaa acaagctctc atgaggcggc ttgtttccct 241 ggcctggctg gctccttccc ccgaagcttt tgcctcaggt agataagcag cactcgggaa 301 tgtatccctt ttctgataca tgaactttcc ccagtctgga acatggaata ctagcacaac 361 agggggcgtg accacaacct attagcatct gggaggctcc cattgggcat caagtggcga 421 cacaaagcag ggctgtctgc tcgggctgag agctgggcac acagagtggc caggcggcag 481 ggtgtgccgc aggctctgaa ggtgggtggc ccttatggta gagaaaccag aaggtctgga 541 agagttgctc atcatccctc atgcggtaga ccaggttgtg ccaggaggca ggcatcgcat 601 ctgggagtcc ataggtttct cg //