LOCUS BG070062 773 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082C12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082C12 3', mRNA sequence. ACCESSION BG070062 VERSION BG070062.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 773) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070062.1. Other_ESTs: H3082C12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: C column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..773 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082C12-3" /db_xref="taxon:10090" /clone="H3082C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 162 c 141 g 250 t ORIGIN 1 acattcgtta caagatttat tcacaccaac aaaaaaaata atcacaacaa aatatatgct 61 aattataaaa ctaaaagggt atagtgatat agactgttac agtttctctt ttaattctgc 121 ttgtttcagt aaatttgctt gtttctacat acattctatt cataaaagaa taacaatcat 181 taaaatgcag tggccgtttg catttcttgt acaggaagaa cagaagcaaa gtgcagaagc 241 ttttggttac aacggtgttt gcatgaaaca acagactaag ctaagagccc aaaatattac 301 ctctctttct ctacatacat atatccactg aactgagaaa tgagcagtta gtattcctgc 361 ttaaccctca ctaacacttt ttcttgtttt tactaaatgc aaagtaagga actgtgtttt 421 tgcctcttct ttagttgacc tcagaagatg aactctctaa ttcatgagaa attcggaatt 481 tcagatacct atcatcttcc ttactcttag ggtctaggac tagcttgtcc ttgtggctgt 541 gaaacttgtg gctctgatgt tccaggctgg ctttggaact tgcttgacta tcgatcacat 601 ccgactgatc ggcactctcc tggctctctt tggaatgctc aagtctgtgt gtttccagac 661 ttggttcatc cagctgactt gactcatggc tgccctttcc gttgttgtcc tgatcagagg 721 gcatgctcag aagctgggca acagggatga catcgaggga ctccttagac tca //