LOCUS BG069969 787 bp mRNA linear EST 12-MAY-2010
DEFINITION H3083B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3083B08 3', mRNA sequence.
ACCESSION BG069969
VERSION BG069969.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 787)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG069969.1.
Other_ESTs: H3083B08-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3083 row: B column: 08
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..787
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3083B08-3"
/db_xref="taxon:10090"
/clone="H3083B08"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 213 a 178 c 171 g 225 t
ORIGIN
1 gcaagcatta taatttattc tcaaggtaac taaatataag tctgtctcag aattttttta
61 aaaacaggaa aaaagagaga gagaaaagag agaaagaaag agctttccat gggttttaaa
121 acaggagaaa aataagaaat gaaataacaa gaatcaaaag atgaatccac catccaccac
181 caaacgctcc agaaccaggg tttcttgtca tgccgcccct gtttctgctt tgttcaggtc
241 ttccttgtgt atcaatctgt gaagtgacaa gctggatgtt catagggctc ccatccaaag
301 aggcaccatt gtactgtctc atagccttca gggcatctgc tttcctttca aagagcacat
361 gtgctgtccc taaacttcat ccagagcgat catagtgcac agattttctc aacgttccaa
421 attcagcaaa gagtttctga atatcagcat ctgacactct gtagtgcagg tttgacagga
481 gcagcttccc accagtatcc atgtggtttc cacccctgaa gccaccaacg aatcggtcat
541 gctgccactt gtctggaagt tgttttggtc tgcggtatgg tgccagcctg ttcctgccac
601 tatgggtgat agcgggcctg tacctcttag gcccagtgcc tcgattcatt cggggatcag
661 gcctgttgcg acttctttgc tggatcttgt tcagcttaat gatgtcttcc aaagtcatgt
721 tcattttgtc agcctgggca ggaatggatt ttggtcttag atcaagttta caagctgcag
781 ttcagtt
//