LOCUS BG069847 706 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080G06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080G06 3', mRNA sequence. ACCESSION BG069847 VERSION BG069847.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 706) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069847.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: G column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..706 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080G06-3" /db_xref="taxon:10090" /clone="H3080G06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 144 c 180 g 196 t ORIGIN 1 agatggttct aaattttatt tcttgtacag ttcagagttg catcataaat accaagtata 61 tccatttgaa ttaaaaacat agtgtaacaa tttaaggtgt ggttctcttg atgctgcatt 121 gttcattgtt cttggtaaca ttaaataaat cagtttatta aatattattg ttcccttagt 181 aaactatatg caagttctcc cccagccaaa attctagagg caattttagg gtgacttggc 241 ccttttaaag tgcttgtgga tggcccagta tccatcttgc tgtagtgaca acattctgga 301 tggagcttga gcacaaagat actaagctgg gatgttgtgg ccctaatcct ggcttggtac 361 ccagcacccc cagatcctgc cagtgctgaa gccacagccc tggaaggctg gcactctggc 421 catgaagccc tggctcaggc tggaatttgc ttgcacgcgc agttggagtc gccgtgggaa 481 tagcttggca cttgcgtgtg ggatctaatg tctttggcaa gacagctggc aggaaaaggc 541 cttgtggaaa caaaggcact aaagatcact caggcaggtg ggggtagaag agtcacactt 601 ggactggcct gtggctttct agcagaatct gattaaagcc agtaacacag gaggctgaag 661 ggtcagggca gatgtcagca tactgaagtg gagacttcct gcagtg //