LOCUS BG069823 754 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080E06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080E06 3', mRNA sequence. ACCESSION BG069823 VERSION BG069823.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 754) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069823.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: E column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..754 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080E06-3" /db_xref="taxon:10090" /clone="H3080E06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 241 a 168 c 154 g 191 t ORIGIN 1 gtctgtctgt ctgtttttaa caatgacatg gaagtgccac atgaggaaag aacaggagtc 61 ttgtttgcaa agtttctgtc tcttgggctg ggaagatagc tcataaaggg cctgcttcat 121 tagcatgaag gcctatgtct gaatttccag aactcacaga gaaaacggga gaacagggga 181 tggcagaaca cactgttaat tccagcactc aagagaaaaa gtctggaggg tttctgccta 241 ccttctgaac taactagtaa gttccaggca agccttgtct acatagagag ttccagacaa 301 gccagagcta tgtagtgagg ccttgtctgt ttaaaaaaaa tttttttttt tcaggcatag 361 caacctgctc ctgtaagccc agtggggaga ggggccaggg tctctggggt ggagagcagg 421 cctctgaagt tcacagacca gcctggtctt ataaattagc ttcaggttca gaaagagact 481 ctgtctcaaa aaataaaggt agagatggat aagaaaaaag acacctgata ttaaccccag 541 gcctacacac acacacacat acacctatgt atatatacat gtacctctaa gcatgagcat 601 acatacacac actatcaaat acacacatac cccattccat cccaaccgaa aaataatagc 661 aaaacccatg tgtcttagaa aactaatagg tttctctaaa taacgtccat catctttcat 721 acaatgcttt acactgaatc tttttcctgc ccag //