LOCUS BG069820 755 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080E03 3', mRNA sequence. ACCESSION BG069820 VERSION BG069820.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 755) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069820.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..755 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080E03-3" /db_xref="taxon:10090" /clone="H3080E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 211 a 172 c 181 g 191 t ORIGIN 1 ctttctttct ttctttctct tacagctctg caggcaaatg ttagacagga gaccttaact 61 cactaacgtg aaaggaaggg aaagactcgc ctgactgaaa cgtaaaatat cggtgtcaac 121 tctctaacct gagccaatct ccggaaagga tatttttagc agtctctcag cacagaccta 181 aagatgcttg cctgcggttt gctcatcttt catcctctac ggggaaggca caggttctca 241 agcagaaccg cccatgtaca cctttcagat tcaatcacag acagaagaag gcttccgtga 301 acgtgatcta gtagctagtg gcgagagaac taatgtaaat acgctagagt tgtactacta 361 attcagctga ctaaggcagt aaaccacagg aaatgtgagt ctctgaaaat tggcagacac 421 tactgtcact tgtggttgaa gagagaaggg aagcagtggt ggatggagcg gatgaggttt 481 ggagggactg ggtcatggca gtaagggaga cagccaaggc tatcacccta catcaccatc 541 cttgtgtcca gcgtggtagg ccatgttgca gatggtctaa cctctgcctt ggctctactc 601 tcgcactgtc ttcattttgc ccaaagaact gagagcagtg ctgaaaatat tatctacgac 661 taaactggaa gagtcttgcc acctccagac aaaagaagag ctctgtgcct tctgaggatg 721 cccatggcaa ctgcttctaa ggattgtctt taata //