LOCUS BG069799 741 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080C05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080C05 3', mRNA sequence. ACCESSION BG069799 VERSION BG069799.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 741) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069799.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: C column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..741 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080C05-3" /db_xref="taxon:10090" /clone="H3080C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 173 c 216 g 179 t ORIGIN 1 attgataaaa tagaatcttt attagtgaat agtgtttagt cataatttca acaactaatc 61 tgtttcaatc cggagatgac ggcaacttct tgtcccaaca ccccaagaac gacgtctttt 121 cctttcctaa gtctcataca cgagtgggat gtagatacag gaactgtgcc ttggagagag 181 gtcactgtgt gagggccagt gcagaagttg ctgggagggg actcctggca ttctgtccac 241 ccagagacag acagacttga tcacgcccac tgcagggtac accgcccctg cctagcaact 301 agcatacgca gatgtatggt ctaagctggc caaggccagt gagaggccac tggttcatga 361 gggcatctgg acagcaagag ccacagaaag attattcctg aggtaggaac agcgtgtgca 421 ggtccagcct gggtggtggt tgtggtgttg ctgaaggaac acatttatag gagcagtggt 481 atctccaaac gtccacaaac gatggccctg gggtgcccta gctggtcacc tcttctggat 541 ggggaccttc agagcaacct ttggctcacc agctccctga gttgctccag gcaccgtccc 601 tccagtcccg ggcttgactg gtggtgtcgg gggtgcaaag gttggcttga cctgcttggg 661 tttcagctct gggaggggct tggtgggagg atcaggtcta aactgatttg gtatctttgg 721 ggcataaaca ggaactggga g //