LOCUS BG069794 702 bp mRNA linear EST 26-JAN-2001 DEFINITION H3080B12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080B12 3', mRNA sequence. ACCESSION BG069794 VERSION BG069794.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 702) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3080B12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: B column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..702 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080B12-3" /db_xref="taxon:10090" /clone="H3080B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 160 a 124 c 161 g 257 t ORIGIN 1 ctacttggct gattttagcc ctgagtttgt ttatttcctg acatctactc ctcttgtgtg 61 tacttccttc tgtttgttgt agagctttca ggctgtgctg tcaactctct gcatttcttt 121 tcaaggcact tagagctagg aggtgtcctc ttagcatgga gttcattgtg tcccatacga 181 tttggtatga tgtgttctca ttatcattaa attctgaagt ctttgatttc tttctttata 241 tcttccttga ccaagtgatc atggagtaga gcattgttca gtttccatgt gtatgtgtgt 301 tgtctagtgt ttgtctgtat tgttttgttc tgtctagtta tgggtaagac aagccttagt 361 ccatggtgat ccgatagtgt acataggatc atggcaatat tcttgtagtt gtagaggcct 421 gtattgtgac gaactagatg tacagctttg gagaaggtac catgaggtgc ccggcacaaa 481 ggtagtaact ataactttta gaaacgtgca tatttggtga ttaaagctga tttaatttga 541 ggacttttca agaattccaa gaatttcttc gaaaatgcag ggtgtatgta gtgtcgtcaa 601 gaatctatgc ttggctgttc ccttgagaac caccagtgat gtctcacgct gtgtctgtct 661 cggacgagcg ttcgagatga cattagaatc tgtacagaaa ac //