LOCUS BG069788 624 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080B05 3', mRNA sequence. ACCESSION BG069788 VERSION BG069788.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 624) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069788.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..624 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080B05-3" /db_xref="taxon:10090" /clone="H3080B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 145 a 156 c 134 g 189 t ORIGIN 1 agtgtgcacg tctgctttag tctttaataa gtggtcagtc tgtatgcaca ccaaagaact 61 gtcttaaatg tatcatcagc agatgcttga cctgcgacct gttcatgtat ctcttgtcgg 121 ctcccatgct tccctttgtg gagatggata atcatacaac acaactaagc cacaagactt 181 tcctttcagg acttacaatt ctgtttttct acagtgtgca aacaaatcca ctttatttac 241 ttatttgtgc acatgtgagg tcagaaaaac aattctcatt ggctctcact ctccacctct 301 ctgaagcctc tctcctaggt ctcccacacc gcgtactcca ggcttaggtc tcccacaccg 361 tgtactccag gctggctgct cctgaggctt ccagatggtt cttccgtctc tgcttctcat 421 cttgaggtag gagtactgag gtaggagtac taggataaac tcaaattgcc aaacctggat 481 ttttttcttt tgtaatttgg gtgtttgcct gcatgtatgt ctgtgcacca cttgcagagg 541 tcagaagagg gcactcaata ccctgggact ggaattactg atggaagtga gctgccatgt 601 gggtgctgga aaccgaaccc aggc //