LOCUS BG069785 758 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080B02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080B02 3', mRNA sequence. ACCESSION BG069785 VERSION BG069785.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 758) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069785.1. Other_ESTs: H3080B02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: B column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..758 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080B02-3" /db_xref="taxon:10090" /clone="H3080B02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 180 c 176 g 208 t ORIGIN 1 ctttaagggg gcctctgtct agaacaggaa acgagtaaca tctggccaaa ggatcccaac 61 agaaggaacc tgataaaaat gaaaaagatg ctcctgatcc acagtgctag ttctgaactt 121 ctcataggca atggaggtca gcaggattgc agtagctacc aggtctagct gaggcctagt 181 caagagtcca cattcacatg tggcaggaac tctaccggcc ttgcttcacc acccaagcca 241 gctgctgggt acccagcctg actgctgaag taagacactg cagccttcct gccacaagtc 301 acgggacact ccctgaagat aagacagcag atggaaaccc atttcatttt tgtttttcca 361 gttttaccca tttgaacttc caaggagaca ctgacctctg gcctcgggaa gtgataggca 421 aagttaatta tgttcttcaa tgctgggtgg ggtttttttc tttctctttt aagttttttt 481 tttttttttt tgagtgagat catgacctca tgtagttgag gacggcctta aactccttct 541 tcacaaactt caggctctca aatgttggga ggacgggtat gtccacatat ccacctcaga 601 agtggtctta atattgacag catgtggtct ccatcttagc ctggcaacct cgggagccag 661 catgcagagg cacatgaggc cagagtgaac tcatgacttc agttgcagct agtctcagaa 721 gaccttgtgt tgcgactgta ctgcttagct gtagttca //