LOCUS BG069784 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080B01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080B01 3', mRNA sequence. ACCESSION BG069784 VERSION BG069784.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069784.1. Other_ESTs: H3080B01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: B column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080B01-3" /db_xref="taxon:10090" /clone="H3080B01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 141 c 125 g 229 t ORIGIN 1 ctccctcaaa cataaacact ggtttttcca actgaataac tgccaaaacc aacctgccag 61 gtgaacgcca tgtgaatgcc acgtgaacac cacgttaaga gctgtctgcc tggagagaaa 121 catgcagagc acacatccga taggtacctg cccatctctc atggaagcaa tggattgtaa 181 ggcagttgtc tgagtcatat actgttgatc atatacttta ctaattttgt tcacccagga 241 aatctggtcg atcatattta attccacctc aagtgtaaat gtaagaaact ggcattaaaa 301 caaacaaaaa aaaaaatcaa tggatttgcc agttctcagg aaaagaaaac tagttagatg 361 gggcgggtgt atgtgtgtca aattactctc tatgaactac tatatgcaat tcaacaaagg 421 aataaaactt aaaccagaaa ggtattaggt acttcatgtc attttctctg catttctcct 481 tgtagttttt gttcatatat ttctccctgt tgtgttttct agttaatgat aatgttagta 541 tctaaataga tttccccatc tctgggggaa cataatgcca gtgaaaggct tgtataagta 601 gaagattcta aatttaggtc agccatattt ctgcattaat tgttaactaa cattttatat 661 ccttaaatga tgctatatag aatacgagat aattctgcca acttcctatt aaacttctgc 721 ttacaatatt cag //