LOCUS BG069780 761 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080A08 3', mRNA sequence. ACCESSION BG069780 VERSION BG069780.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 761) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069780.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..761 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080A08-3" /db_xref="taxon:10090" /clone="H3080A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 192 a 164 c 154 g 251 t ORIGIN 1 ccaaggactt tttttttttt aatgtattta cacatactgt tcttaggttc ttttaatact 61 agtctctgac attataaaac ttcagtattg ttttttgccc tttgagaatt ttaaaataca 121 aattgaatta aaagattgtt ccaaaatctg catcaccaaa aggtgttaaa acatttctta 181 gggcagggaa gagttcatct ttagttgcta ttgtctggga tgaacaggaa gaagtggctg 241 acacactgga gacacctgtg cacaccaaga cactgctaca cttcccttcc cttgcacctg 301 cacagttcta ggaggcatcc cactgttggc agctgttggt tgtgcactat agactggctc 361 cagtgatctg gccattatat tctgctgtct ccatcttgag gatgtaagga attatgctgt 421 ctattgaaac attgccaatg agaccagtaa aaaaaagttc ttctgttatg ttggagctca 481 tgagcctgag tgctggtagg cggacaagaa tcctggccaa tctgtaagta tcttcagagt 541 aggttttctg cacatagtcc tgtaattcca tctgtgcctt ctcctgaaat ttctcaatct 601 ggcttgtgcc tgtcaaacct ggatgattca tagccgtcta tatccagttt cgccatgctg 661 ttacagaact cctgcagctt ccagatgtgc tccatcactt gctttatccg gtcaccagaa 721 agcttatctt cctggatgct gttctgtagg tggttgacaa t //