LOCUS BG069779 724 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080A07 3', mRNA sequence. ACCESSION BG069779 VERSION BG069779.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 724) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069779.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..724 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080A07-3" /db_xref="taxon:10090" /clone="H3080A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 243 a 146 c 137 g 198 t ORIGIN 1 gttcttattg atcacaattt attgtaaagt catgaaaggc cagcaacagt cagtctggac 61 aatacttgat tgcacccagt tgatgggatg tggacagcag cactgagtta cacgaagaga 121 gcaacacttt tccaccttcc tagaaaaata ttggttagat aaggcagagg acgggcagct 181 actgaaggtg atagtaacca tgcaagaaca acagataggt gtgcaataaa catcactgct 241 aaagcttggg ctgaaaaggc aagggataaa atggatttca gccaagaatt tctaaggatt 301 aatgcaaaaa atgagatttt taaagaatgt cttgaagcta cctctataca aggtaggacc 361 caaacgtaat ttcccgtagt cttaagattg aagatgcaca agtggcttgg ttctggtctc 421 attttcttta gagctcaaga ttatagaaat gttcaacaac aacaacaaaa acattcacac 481 ctaagcataa atagctaaat tgaagattac tgttcacttt cttcttccat tatttcaact 541 cttcgaggcc cataaagtag aacataagca atgtgccagt ctccaccacc agacagccgc 601 agaatatctt ctggggttac aatgctgacc ttatcatcat caaatttgat ccattcatct 661 tgttttcttc tcacccatga tacataatga cctgaagaac tagatcttcc ctggtgagtt 721 aaca //