LOCUS BG069778 787 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080A06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080A06 3', mRNA sequence. ACCESSION BG069778 VERSION BG069778.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 787) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069778.1. Other_ESTs: H3080A06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: A column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..787 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080A06-3" /db_xref="taxon:10090" /clone="H3080A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 191 a 187 c 190 g 219 t ORIGIN 1 tttttttaaa gatttattta ttgtatgtaa gtaccctgta gctgtcttca gacactccag 61 aagacagagt cagatctctt tacagatggt tgtgagccac catgtggttg ctgggaattg 121 aactcaggac ctttgtaaga gcagtcagta ctcttaacgg ctgagccatc tctctagcct 181 aaaagcctcc ttcaagcctg tctgtgctgg ctacttttat gtcaacttgg cacaaactaa 241 agtcatttga gaggaaggaa tctcaattta taaaacactg taggcaagcc tgtagggcat 301 tttcttaatt agtgattgat gggggaggcc cagctcattg tgggtggggc cattcctggt 361 ctggtgagcc tggttccagc aagccgtggg gagcaaacca gtaggcagca ttccttcaga 421 ctctggatca gctcctgcct ccaggtccct ggcctgtttg agttgctgtc ctgacctcct 481 tcagtgatga acagcactat ggaagggtga ggcaaataaa accctttcct ctctgagaga 541 ctttcaccat ggcgtttcat cacagcaatg agaaccctaa gacactaccc agccctacca 601 cctcttcctc caacccatta tctttacagg agatttttgt gttccttcca acctcagagc 661 tgacccaggt ttggagttca ggtctctatt caggtagatg taggagcaag gcatacggta 721 gaggcgacgt cgtcttggcc tgtagaagag gactagcagc cagaatgtgt actcttgtga 781 ggatgca //