LOCUS BG069750 630 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079G02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079G02 3', mRNA sequence. ACCESSION BG069750 VERSION BG069750.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 630) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069750.1. Other_ESTs: H3079G02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: G column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..630 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079G02-3" /db_xref="taxon:10090" /clone="H3079G02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 136 c 150 g 166 t ORIGIN 1 ggagacagca attttttttt aattggaaaa atgcaatggg ctcattttag aaaataaagt 61 agaaatttgg gtttttctct tttctgtacc aaaaagtcac cttcagacca gaagttctta 121 gctctgacac aacagtgaga ggctgaaggc tatcaggagg agagagataa tcacaaatgc 181 caggtgcaag aaacaacact gcctagaggt ctgcagatgt aactagggga ctcagcccaa 241 gtccctggca ggctagacag tgttcccaaa gacaatctgg cctcaccaag actcttgctc 301 agatgccaga ggaacagaat taactttgga aagaacataa ggcatcaaag tggctttgcc 361 tttgaaacag aattgcaaga ctagcgttgc tgggtttcag aatcctcgta cgggctcagg 421 gtgctggcac accatgggcc tcatgctgtt gggcttgttg atgttacagg ctttgtagac 481 ccagcttata cagtccaggt ggcttcaagc tcatgaggca gcctctcgcc ctcttgcctc 541 agcgtcgtga aatttcacca gtacactaga accttttaaa agtatatgta ctttcattct 601 cttcttgtta gtgaaggcag ggctgatatg //