LOCUS BG069745 692 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079F08 3', mRNA sequence. ACCESSION BG069745 VERSION BG069745.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 692) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069745.1. Other_ESTs: H3079F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..692 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079F08-3" /db_xref="taxon:10090" /clone="H3079F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 144 a 132 c 246 g 170 t ORIGIN 1 ggctggcagg gtgtctttgg gctgggtggg gaatcttgct ttagagccgg agcaggttat 61 acagtattta ccatcctcac gaagggacga gaggaagggc agggctggga gcgagagagg 121 gagacagata aaaacagtgg accccagagc ttgggccacc agccttcaag tgctgtcaga 181 ggaggtccag ctctgggcac agcctagatg accacggact gcaggaggcg gaagcacatc 241 atgaggtcca gtgggatggg aggcttcaga aaatttccat ccagccgcag tagcgcaggt 301 ggggcacgtt ttccagatcc gaggagaagt catggaaggc cactaggttg ttggggcaaa 361 tctgggtccc gttgattttc tctatgctat tgttgttgag gtacaggtgt tccagcttgt 421 tgctgatggc cggcacgttg ctgatcttgt tgtgagacag gtggagcacc agcaagttgg 481 agatgttgaa ggagttcttg gggagcccgc gatctgacag tttgttgtag ttcatgcgga 541 tgaaggccag gttggggaag tccttgaagt acccgttggg gatggtctcg atcttgttgc 601 tatccaggta gagctggtgg atggcttggg ggactttggg gggcatcttt ctcaggatgt 661 tgtgggctag attgagctgc atgaggtttt tg //