LOCUS BG069702 768 bp mRNA linear EST 12-MAY-2010 DEFINITION H3079B11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3079B11 3', mRNA sequence. ACCESSION BG069702 VERSION BG069702.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 768) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069702.1. Other_ESTs: H3079B11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3079 row: B column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..768 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3079B11-3" /db_xref="taxon:10090" /clone="H3079B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 232 a 152 c 155 g 229 t ORIGIN 1 cacaaaacaa caaagagctt tattgtatat ctgtttaatt atatcatgaa ccttattagt 61 acagtatcta tcctgaaaat tctagtcaga taaaaaatgg cataatgatg tttgaagatg 121 agtcagtggc aatttcagag ttttttactt atcaagagtg aaaacagaac acaatgaaaa 181 ctagctaaaa aaaaaggcaa cacagtcata gcatatgata ttctgtagct gttggtaggg 241 cttacatctg atgtgcagca ttcttaatgc cattcaaaca gttcttttct ctgtcacatc 301 ttagcagttg atgctatgag tctgggagag agtgactatg ggtaacactt ctggtcttca 361 gctgtgactg tgcaatgtca gcaagtgcac tttggatctt ctccagaagc atgtctcctc 421 gataaacaac atcctccaga catgtagcag cttcgtgatt ttcttcttct agcttatata 481 agctagcagc ctgtaaagca gctgtagact cttcactggg taaggaatct atcaaaacat 541 caatatcttt tgctgttcgt gcaatcagtg ctgcaaaaag ctgagcatac tcttctgtag 601 gattggctgg ttgatcttta ttaattgctg tttgaatgtt actaaaagag gcaggaggac 661 cacactgctg taatacacca atggcattac aaaactgatc tgcaagcgag ttcacagcgt 721 cctgcagctg agtgagtcta tccgccatgt tcaccacgca cgcaaggg //