LOCUS BG069676 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3078H08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3078H08 3', mRNA sequence. ACCESSION BG069676 VERSION BG069676.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069676.1. Other_ESTs: H3078H08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3078 row: H column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3078H08-3" /db_xref="taxon:10090" /clone="H3078H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 188 a 155 c 143 g 176 t ORIGIN 1 ctgagaccaa tatgaagcaa gctttattta catactgttc aggatgatag actctggcca 61 ggtccactcc cgggtttcca gagactggca ataagtcatc acatttaggc ttaaaaaggc 121 aaacccataa agccaccgca tttcccatca ggtccaaaca tatgtcctga tgtatttcct 181 gcccacgtgc ctccccacta catgtgatca agcacatcca gtgtggtgtg tcaaacaaag 241 atgtttaggg agtgtggaac atgtggcttg ctatctccca tagatggcag cccccggcct 301 ttcaggaagg tggtctacaa tagaggcatt tttgtttagt gggtctctta aggcaccata 361 attaaaattt taagtataac tatctctcac attctcccct tgagttgtat cctgagtcga 421 atccctgact ctgtgatggg tacctgttta catcagaatc caataaccac cagcttaatg 481 gtacccaggc agaaattatt atccagttaa ggcattaatt gatgagccag agccaatagt 541 aatcagcaga aatacagggt caaagaccct gagatggccg agcgagttgc taactagaag 601 gagcatgaga ctgggaaaca gccatttgct tcattgcggg tcctcagatt acctctgatg 661 at //