LOCUS BG069629 773 bp mRNA linear EST 12-MAY-2010 DEFINITION H3078D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3078D08 3', mRNA sequence. ACCESSION BG069629 VERSION BG069629.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 773) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069629.1. Other_ESTs: H3078D08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3078 row: D column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..773 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3078D08-3" /db_xref="taxon:10090" /clone="H3078D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 226 a 165 c 176 g 206 t ORIGIN 1 cgagacaggg tttctctgtg tagccctggc tgtcctgaaa ctcactctgt agaccaggct 61 ggattcaaac tcagaaatcc acctgcctct gcctcccaag tgctgggact aaaggcatgt 121 accactactg cccggcctac atcacctctt gataggatat tttatgacag tacatgaact 181 actgcacaga gcgctgcccc accaaacact tcttttagca ggaagaagtc atgtcttggt 241 gaagtgacaa gtgtgagagc actgctcaag agaaaacttt acactaggtt cagagggttc 301 taaagacaga gagacttccc aaccacccct agaatattct gaaagggaag gagactcaga 361 gattctacct ctgtaatatg aaggccctct tagacccttt aaagcctaga gaagtcatgg 421 acaagtcaca tatactagtg ccctttgact aaaaaaagta cactagagta ggcatgaaat 481 cgtgacattg tttctgtgtt ttgttttgtt ttttaaaagt ttaagtgcat gttaatggtt 541 agcttcaatt atcaactgga caaaacttag tatcacctgg gaagaaaggc tcaatgaacg 601 actgtttaca ttggattggc ctttgggctt gcctgtggtg ggttgaacta attatgttaa 661 ctgatgtggg aagacctagt ccactgtggg tggcaccatt ccctatgcag ggtattctga 721 aatgtatggg agtgaagaaa tcaaccgtgc acagacaaac aaacaagctg tga //