LOCUS BG069542 508 bp mRNA linear EST 12-MAY-2010 DEFINITION H3077E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3077E03 3', mRNA sequence. ACCESSION BG069542 VERSION BG069542.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 508) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069542.1. Other_ESTs: H3077E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3077 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..508 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3077E03-3" /db_xref="taxon:10090" /clone="H3077E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 187 a 104 c 93 g 124 t ORIGIN 1 aaccaatcca tttgtttaat tcttaaattc ttgacattac agaactaaac tgaaatttat 61 taacattcca ctcttacatt tcttatcgac aaacagaaaa taaaatccat gagccaaaaa 121 aacccaaacg aaactaaaaa cagggaaaag cttataaaac taaatatgga tcccagcatt 181 aacggctgaa cagagaatgt gatttttctt taaattctta gcggatgata aagtgtagaa 241 actgaacact tacaaattat ttaaaacctg gaattaccga ccagaaatta cacagttgga 301 tcatgggaaa cagcaggaag ggggttacga gcgaacctac gctgttctag ctgcacccca 361 tccccttctc agaggaaagc ctggcattga ttagatactg ggccaggcta atactggcag 421 ccgagccagt aatagtgatt acagacatgt gccatgaaac ccagctacat aatctttaag 481 gacaaatatc tgggaacacg gggtgcag //