LOCUS BG069448 712 bp mRNA linear EST 12-MAY-2010 DEFINITION H3075F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3075F07 3', mRNA sequence. ACCESSION BG069448 VERSION BG069448.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 712) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069448.1. Other_ESTs: H3075F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3075 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3075F07-3" /db_xref="taxon:10090" /clone="H3075F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 217 a 176 c 141 g 178 t ORIGIN 1 aaaatagagt aactttattc atggagaaaa cagctaatga aacaccctag agacttttag 61 tcatttaaaa caaattaaaa acctactagg aagagtctat agatgcaaga tcaccttgcc 121 cgtctgatct tctacccttg gagtgcacga gctacacctg gcttacgagg tgctggatac 181 tgaacccagg gctccgtgca tgccaagcat gtgctctacc agccaagtga caactgtggc 241 tcctagggac actttaattc cattgtcttc atctgcttaa gattcctctg tgagagcaga 301 gaagagtgaa gagccgaaga attaatttga cgactaggag gaggtaggaa ttctggtggc 361 tagatcataa gtcacatagt gctgggaaaa acaccatatc ctaacaaact gaggtgctga 421 ctcagcacag atgtgtatgt atacacacac acacacacac acacacacac acacacacac 481 acacacacac acactctctc tctccctctc tcacttcctc cttctcttgg atgcttatgt 541 ctgtgtggat catgatacca atatggtatg agaaacacac actcctcata agagcttaaa 601 actggatgga gtaggacact tctctggaca aactctaatc agttttcgct ctaagatggg 661 cccaaggcag caacatcata gatgacttac ttcttcctgt ccctgtgtgt gg //