LOCUS BG069402 763 bp mRNA linear EST 12-MAY-2010 DEFINITION H3076H11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3076H11 3', mRNA sequence. ACCESSION BG069402 VERSION BG069402.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 763) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069402.1. Other_ESTs: H3076H11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3076 row: H column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..763 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3076H11-3" /db_xref="taxon:10090" /clone="H3076H11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 248 a 141 c 166 g 208 t ORIGIN 1 ccatttaaaa gtactttatt tttttttcca gtcaaatgac tggttaacag gaagtcaatt 61 tattaaacat gctctaatta taaatcactg cattaagaca atgaaaataa tccgtttagg 121 ttatacagta tatacagttg cgctgcacta gaccaaagta atcaagtgaa tgaattgaat 181 atcatacatc tcaaaatagc attcttggct gcaggtcatt ctccacctca gcagatcaca 241 ttagtctgcg cactatttct cagtcatcgt cccccaagtc agacctgatg gaaagcagcg 301 gaaaaaaagt ccgattccgc agctgacgct tgtgaaatgt aaactttaaa tataaataga 361 tatctacaat gctttccttt cagttgcttt ctcttctcag tttgcaaaga gcgagtaaca 421 ggaaggacaa ttaaggaggg aagtcaatag aacttctctt ctggtaaaaa ggactaccca 481 ttactgcaca atagtgccac caaattagag agcggaaaaa tatttcctag gtatttatgt 541 accagtgaac ctgatagatt agcttgggac tggagttaaa atgttgacat aaatcaacta 601 gattcctcag agagctggca ccaggtacct aagaccgatg atacagatgc gtgtgggggt 661 gggggtgggg gtgggggagg cactgtaaaa ggtattggga agtgcaatgt gcaaaacgca 721 tctgttcacg ctcttaagtc tacgagaaaa gtgatgagaa ggg //