LOCUS BG069279 698 bp mRNA linear EST 12-MAY-2010 DEFINITION H3074F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3074F08 3', mRNA sequence. ACCESSION BG069279 VERSION BG069279.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 698) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069279.1. Other_ESTs: H3074F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3074 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..698 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3074F08-3" /db_xref="taxon:10090" /clone="H3074F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 247 a 165 c 110 g 176 t ORIGIN 1 atacagggca atactgtaac ttcactgttg gttccaaatt caacacagta caaagcaagg 61 aaacatttat ttactacact cacacagtaa tgatcaagca tcctcatgtt tgcccagata 121 gcttaaaata gcaaatattc agtccccaca agaagaactg tcttcggttt taagccaagt 181 caaagaatag aagggaaacc cattactcgc tgagcttggc actcaggcac cattctcgga 241 cctggcgcaa acatcagccc acatcagcat tgcttctact cggcttcact gctttaccag 301 gtaaggaaca caagctaagg ttctaacacc ttatccagac aagtttaact aactctaaga 361 tcacatgact tgacaagaaa tatacaaatg ttggttaaga acttaccgtt ctgtcaatca 421 ttttaaagag tccatgaaat atacatagca atatatttgt aaccagaaac tacactaatt 481 agacacatca tttagtttgt taagttctac ctgaaaacat gccattttaa gtaaaatcct 541 aaaaacataa ctctcaagtt ctatggttta acaaccaagt cccactaaaa cagcacagat 601 ttcctttcac aagcgcggcc agcaacaaga caaactgcgg tatgtcagac aaacaggtcc 661 ccaagttctt ctgaagaaca ccaaggagtt gccagaga //