LOCUS BG069218 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3074A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3074A07 3', mRNA sequence. ACCESSION BG069218 VERSION BG069218.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069218.1. Other_ESTs: H3074A07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3074 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3074A07-3" /db_xref="taxon:10090" /clone="H3074A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 236 a 140 c 114 g 188 t ORIGIN 1 gcttattcaa aacagattta ttagaaccta tgagaaatta taatggtaac ggtggtggta 61 gaagataata gcaggctact ggacctcccc aagaaagaga tacagcttaa tagtgataac 121 agtctaatac aaaaatactc caaggttcag tcagacttat actccataaa aataagtcca 181 tatactgtag aacagtaagg ggagagcaaa aaggtggatg ccatctgcag ggagaatgaa 241 acagagacct cctattcaag tccattatga tctttataat gtcctcactc tttatcccct 301 tccctacttc tagggtccct catactcaga aagtgctgga atgaacccct acaattttca 361 gatataattg ctgttcaagg gtttgtctgt actgtagaca ttaggctgaa aataagctca 421 tgattttcca tctcaacaca actacctcaa atcagaagaa tttgactgac attcaaagaa 481 aatgaaataa ttatctttcc aaagtacatc cgaaaatgct tgaatacata tgttctataa 541 ctgtaatgag tctcttgaga cctgctctcc atttatcaga gcccaggaaa gacctctcct 601 tcttaattgc tcagaagaat ccaggccctt caaattataa atgaggaatt cataattacg 661 taaacacggc atactcac //