LOCUS BG069087 654 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072F01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072F01 3', mRNA sequence. ACCESSION BG069087 VERSION BG069087.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 654) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069087.1. Other_ESTs: H3072F01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: F column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..654 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072F01-3" /db_xref="taxon:10090" /clone="H3072F01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 172 a 136 c 123 g 223 t ORIGIN 1 ctctagaatt attaggtaga aaattggtgc tgcccccagc tgtgtagcct tgtttcttcc 61 tgcttggtgc ctgtgcacct tattcctttt tttatggatt gtgccccagc taggaccttt 121 agagcagtgc aaagtatcgt caatgccagg gatttccacc atctctgagg atgtagtcct 181 gctttgggaa ggttctctgg tatctcattc cctcacttga agctaagcta acttccccat 241 gacagccttg agcacagcat tgcatcttca tgtggactgg ggtgtttctg agggggaggt 301 tgagcagatc tgtgttttgt gggatgttaa ggcatgtgag catcttcact ccactgttga 361 atatcagcca gcctcccttt cactcataat aataactcag tccacatctt ctattctatc 421 aataacagta gaaaatcctg gtaattttac tgagtctgac aactcctctt ttataccttt 481 caatatcata gttctcttta ttcatgattc cattctcaat agcctgcaat ggtgttctat 541 aacttaaata atacctaagt cctgtttaag gaggacaaat aattctataa atgatgtcaa 601 atttttatgg ttttacttaa agatgtaaaa ataaaatatg attggacaaa taaa //