LOCUS BG069077 623 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072E03 3', mRNA sequence. ACCESSION BG069077 VERSION BG069077.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 623) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069077.1. Other_ESTs: H3072E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..623 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072E03-3" /db_xref="taxon:10090" /clone="H3072E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 133 c 86 g 191 t ORIGIN 1 aaattataaa tatttatttc attctataaa aatattgtca ttacaatgtt ggttgtgaaa 61 ttgttagaaa atacacaaat ataaaaagac tgaagtcaaa aacacccagg cttcctggtc 121 tttaatgtca caccatggac accaacatcc cactggtttg ttaccatatt agcagcactt 181 tattgtattg cattagggta tgatattaca tcacagcaca gattatctac caattccctg 241 ttcattcaca ttaggaaatt tcttatttat aacagtacta agctttgatt ataacctgtg 301 ttaaatgact cttacaagca taagtattaa gtcaaaggaa gcagtttcaa gctttcccac 361 ggatagtaaa tagccaagtg accttcagga cattggtact aacacccctc ctaccatcaa 421 tgtccaaatg attctaattt atcatctctt agtttaacac tgtttttaga agaaaaatga 481 ccaactcatg ctccctttag actctccatc agaatccaca caaaagcaca gaactggagt 541 gtgtcaccac ataattccaa ctactaactt tccagcaaca agacgactac cctgaattct 601 ccaaattttg gagtgaagct gtg //