LOCUS BG069070 779 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072D07 3', mRNA sequence. ACCESSION BG069070 VERSION BG069070.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 779) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069070.1. Other_ESTs: H3072D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..779 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072D07-3" /db_xref="taxon:10090" /clone="H3072D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 195 c 200 g 211 t ORIGIN 1 ttttattttc attaaaaatt ttttatattt attttatcct atgctcctga gtgttttgac 61 ggcatgtatg gatatgtacc atgtgttcct ggtgcctgca caggccagga aagggagtca 121 gatctcctgg aactggagtt acagatagcc atgagctgcc atgtggttgc tggaaattag 181 acccagagct cttaatcact gagccatctc tccagcccct tctcccacac ttaacttccc 241 ctccccaacc tcaatttgct ttttgaggca ggctctcttt ttcagacctg ggactagaat 301 gtctggccaa tgaacctctg gggtgtcctg tctctaccca cccaccccca aacccctgga 361 tcacaaacaa gccccacacg aactgtaact gactttccaa gtaggtgctg gggatcgaac 421 ctgagcccct atgcttgttc agcaagcatt ttacctacta gtcatctcct caggccccga 481 gaagacagtc ttcctcactc ggcttgtgat ttgttttgca atccatgcca ttgctttgct 541 gggctgacga gaagctggaa tgatgggggt ggaggtgggg tgactcatga ggcaagggtg 601 tctggaaggg gtccctggga ggcactacca aagttcactt ggcctgtacc aggaaggtag 661 gagggggcag gggttactct aacctctgga ttctgaagga aaagggtaga tttctctggg 721 ggggggcaga aactcgctct ggcttgaagg agagagtgac ttctcagtgc tcgtgccac //