LOCUS BG069039 712 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072A10 3', mRNA sequence. ACCESSION BG069039 VERSION BG069039.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 712) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069039.1. Other_ESTs: H3072A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072A10-3" /db_xref="taxon:10090" /clone="H3072A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 159 c 120 g 249 t ORIGIN 1 aagtttgctc tattttgacc tctcttatag aggatttgta atgctataac tcgcaaacat 61 aactttctgc attttggtaa ttaaaacaat tcaaagacat tacattgcca tatgccaggc 121 taagcaatcg cagaattcct gtggagccca tgttcaaaga acctagttgc ttataaaaca 181 ttggcttcca ccagttcctc catttcattt ctgtatttta tttagatttg ctttcagtgg 241 tctgcctctt ctgttaaggt cgtatcagat aaacgaggtc taatatcaat tgtatatcta 301 atccattcat ctattggtgc tgaccttgcc tgcattcaac atttgcattt tcaaaagcta 361 aagactcgat tattgccttt cttgctgatg gagctgttat actgctttct acaacggaag 421 ttaaccttta caaaaagtca gggaatgttt cttttggacc ttgcatgact taagaaattg 481 gttcaagtcc tttccctgtt tctgtgactt tgtcctgggc attgaaggct gccacgtgac 541 ataatgtcaa ggtttcttca tcatagtcag cctcagcaaa acaacgttca ccaagcagct 601 gatcgctaga tatattgata cctctggctt tatcttgtcc tgctatctcc ttcacctctt 661 ctctccacca tgagaactgg taactatgac ccaggttcta atattgctct tg //