LOCUS BG069035 719 bp mRNA linear EST 12-MAY-2010 DEFINITION H3072A06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3072A06 3', mRNA sequence. ACCESSION BG069035 VERSION BG069035.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 719) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069035.1. Other_ESTs: H3072A06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3072 row: A column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..719 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3072A06-3" /db_xref="taxon:10090" /clone="H3072A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 228 a 164 c 149 g 178 t ORIGIN 1 ctcactgcta tgacaaaaag taaatgcagt ttaagtaaag aacaggaatt tggggagtag 61 gaccatggtt taagggatta tggcccatca tggcacagca gctatgacta ctgggacagc 121 taatcaaatt gttgatcctg cagtcaggaa gcagaaaaag agatggacac tgattctcag 181 agcaccttct ccttgctctg ttttatacag tatagaacat cagcccttgt gagagccctt 241 cccacactga ggatgtgtct cttctgctca attattccag tttgttactc tcaacattaa 301 atagatcata ccatgcagtt gcacagcctc aagcccaacc tttccaccca tctccagcat 361 ttactgtgaa gattcagttc aaatgtcaca aaagaaaaga aaaagaagaa aagaaactaa 421 tggagggaaa gttttgatcc tgcagtgttt ggaacagaga attccctctc tggtaaaccc 481 ttcagggcag tcttaaagac acatctcttc agcaatccta aatcaagcca ctgaaagatt 541 agccatcata aggtgacagg ctgggtcaat ttagtcagcc atttcattag ctcacaaatt 601 tgaaagctaa aagtccaaac aacacggcac tggccccagt gaaggccctg ttgcctaagt 661 cacctcatgg tgcatggcag cctctagatc agagcaagca tgagagattc cgtggtgaa //