LOCUS BG068984 626 bp mRNA linear EST 12-MAY-2010 DEFINITION H3071D12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071D12 3', mRNA sequence. ACCESSION BG068984 VERSION BG068984.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 626) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068984.1. Other_ESTs: H3071D12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: D column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..626 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071D12-3" /db_xref="taxon:10090" /clone="H3071D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 142 a 141 c 113 g 230 t ORIGIN 1 tttatatgtt acttgacctt tctcccttac tgcttttaat attctatctt tatttagtgt 61 atactgatgt aagaccatta ctgcagcatg cataacatcc tcatgatgtt aacatggcag 121 ctaactgact ctccttcccc cagctgaagt caatggtcac tattaccatt tgaatggaca 181 ttcccaaggc tttctcctat tcgcagtagc attttggcta gcctttttct gtgcaggtct 241 tttataagta gtcacagggg atgaattcat atacacaggg ccctggtgag tactccctgt 301 ttaattcaag ctgaaatgtt taactgtgtg catgttttcc tgccatttag tttttaaggt 361 tctttgtata ttctacacac caacactttg acagaagtaa acttggtaaa ggtttttcaa 421 ccattcttta tgcagtctct ttgtcacaag gatgttctcc ttctctttgc tcgagctttt 481 ctttttctga gttctcattg gtcaactgat aagtttactg cccacatcac caggacccag 541 ttgaagaagt cctttcctct gctaggatgg caagccactt tgtccactat tgggttcagg 601 gtatcaggtc ttgtgctgag gtcctt //