LOCUS BG068960 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3071B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071B10 3', mRNA sequence. ACCESSION BG068960 VERSION BG068960.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068960.1. Other_ESTs: H3071B10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: B column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071B10-3" /db_xref="taxon:10090" /clone="H3071B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 107 c 156 g 214 t ORIGIN 1 ctcacttaaa atctgcttga ctttgtcttt ttagagtagc tccattccag ggtctggcca 61 gtgcttcata gtgctttctg ggctagctct gcacaactcc ttgtagctag aatttagtga 121 tttcataaac agatagtccg ctttgtgtct gtatttgggg aaaataattt tcttgcctgg 181 tttctttaac aaaatgatta gagcagacta agggttttga tacatgcagg tactgggaaa 241 taagttttac attgtctgtt gcaaaaaaaa aaaaaaaaaa aacccaaaaa accactttag 301 attgaaaaga atgttttgta ctaaaaacat atctttctta aaaatgaaaa agggtcaaaa 361 ttatggggtt tatccataat taaacttttt caattttgag tgctgcctcg tcactgtgtg 421 tgtacaacag tgcacctgag tgaattcttt gtgtgtgtgt ggcggggggc tggggtgggg 481 tggaagcatt tgtagaggac aactagaacc ctccctgtaa taactgggct acagatagag 541 tatgtataca tttgccttat gctggtatac atgacttgat ggtagatatg gtaatatgag 601 gtcatgggtg acaaatggag caggggactg attccaaggg tcagtgcatg ttagagttta 661 agccaaacag cttct //