LOCUS BG068949 707 bp mRNA linear EST 18-DEC-2003 DEFINITION H3071A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071A10 3', mRNA sequence. ACCESSION BG068949 VERSION BG068949.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 707) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT On Jan 26, 2001 this sequence version replaced BG068949.1. Other_ESTs: H3071A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..707 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071A10-3" /db_xref="taxon:10090" /clone="H3071A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 216 a 142 c 152 g 197 t ORIGIN 1 gtatttagac ggatgagcct aaaaccagag tgacatcctg atagggcaga ctggcaatgt 61 gaggatccag atgaaaagcc acaacaaact actaacattg ttttagaata ttctttttaa 121 tgattatgtg tttctgtgta catgaacaca tgtgtagtag gtgaccagag aggccaggtg 181 agggcatccg atccagaaat gtagttacat gggtgctggg aactgaactg cagccctcaa 241 caggagtggt gttaatctct caacaccacc ccctaacatt tttcttaaaa tgaaagaaag 301 aaagaaagaa atctaaagtg caggtcatca aacaatcagc ccagatttcc acgtttttta 361 atcgtgtatc tgtgatggaa aagcaattgt tccatcatat aggctatttt gttttgtttc 421 ttgtttgttt ttttttccaa gacagggttt ctctgtgtag ccctggctat cctggaactc 481 actctgtaga ccaggctggc cttgaactca gaaatctgcc tgcctctgcc tcccaagtgc 541 tgggattaaa ggagtgggcc acaactgcct ggctatattt tttaaaaaat atatacatat 601 aaaaaaaaga tgtcaagatg gagaagacaa ttggagcgtg gaaggaagca catttctttc 661 acattcaaag ctcacaacac agccccacac acagacaggc gttttgt //