LOCUS BG068892 575 bp mRNA linear EST 12-MAY-2010 DEFINITION H3070D11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3070D11 3', mRNA sequence. ACCESSION BG068892 VERSION BG068892.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 575) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068892.1. Other_ESTs: H3070D11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3070 row: D column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..575 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3070D11-3" /db_xref="taxon:10090" /clone="H3070D11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 195 a 112 c 95 g 173 t ORIGIN 1 cactcccact catagcttag gagcagcttg aagagttaaa cgtgtatttc cttattaaca 61 tatataattt taatgccttt ggaaaacttt ttaataaaat gtatttttca caataaaatt 121 taaatacata agtataaaaa ctactgctct agggtcagaa ccaggagctt gaaccctcta 181 gagagcaact ctgattctac gaagtgcact aggtgtgtgt atgacataga gtgaaagccc 241 cattcaaatg acagtttaca cttctcctca atttagacta ttcccaggca ttgtaaataa 301 tgcattatcg tcagtaatct gtaattacat ttaggatgat gggtaaacaa tgcaatatgc 361 agtgataact ggcccttaca gaagggaaag agtttcccca tacagggcta atgagtgctc 421 agaaattaaa atatagtttc ttcttcttct ttcttttaaa aaagagatac atagccttct 481 ataaacctcc cttcacccct gccccaacag aaggggtccc aaaataaggt gttaacaagt 541 gcttaataga tacatttcat aagttgatgc cacaa //