LOCUS BG068879 532 bp mRNA linear EST 12-MAY-2010 DEFINITION H3070C09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3070C09 3', mRNA sequence. ACCESSION BG068879 VERSION BG068879.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 532) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068879.1. Other_ESTs: H3070C09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3070 row: C column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..532 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3070C09-3" /db_xref="taxon:10090" /clone="H3070C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 157 a 94 c 140 g 141 t ORIGIN 1 gagatttcat ttacctcctt taatatattt gacattagga aggaaagaat acagtagaca 61 attaaaacca atagggagca caggagaacc tctatgccaa taaacctgga aatgtgctgt 121 tcatgcttac aggttaggat ggggtcttaa aatacactaa ctggtgaaaa ctttaaaaaa 181 aattgataga atgtcattta atattaagaa catgtaagtc actatgtttt atgggacggt 241 gttaccagct cttgagagga aacaatatgg ggtgtgtgtg tgtgtgtgtg tgtgcagaga 301 acctgtttcc ccaccctacc cccgtcccaa gtccatcctc cattaagtgg ggcttttcaa 361 gagatttcgg ggagtgtctg ctgggttctg tgatgccaga atgctctggg gtcactacat 421 ggcagccagg gagtaaagga ccttctctga gggaagagga ctgggcagag gctttgaaag 481 cctgaggaag tcgggggtgg gaatcccatg aaacaaggta acatattgga ct //