LOCUS BG068798 672 bp mRNA linear EST 12-MAY-2010 DEFINITION H3069D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3069D09 3', mRNA sequence. ACCESSION BG068798 VERSION BG068798.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 672) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068798.1. Other_ESTs: H3069D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3069 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..672 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3069D09-3" /db_xref="taxon:10090" /clone="H3069D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 245 a 137 c 110 g 180 t ORIGIN 1 gcaaacagac aaagtatttt atttagacat gattttgtaa accatcacac tgtacttttt 61 aattccacaa gaacattatt tccctcccac acacttacag taagccctgt gcaaagtcaa 121 aagagtgaat acaagagtaa agacaaacaa gttggagttt ccttaaagtg tcaaattgtg 181 ctacttgata caaagactca caaccacctg taccataaaa ggttacatgc cacaaaacat 241 taattaataa ttttaatata tagtaaaaca catttattta aaaaaccatc aggattaatt 301 ttattataaa caagtgaatt atccagagga atatttatta aaactcacta aaacccagca 361 aatattgcaa ctgaaataaa aatgtatacc caaacaaaac tataaaaatt tacatgtaaa 421 caaaactatc attaaggacc aaggagtgag ggagggcaga gggcgtttcc cgagtctcct 481 cactccctga tgttctgaag gagtttcagc agatgggact cgatggcctg ttggacacct 541 ctgtagccca aagctacagc taggtccata gaattatagc cagagtctgt ttcaattgtt 601 gggtcagctc cattttccaa cagcatcttc acgcacttca cgtggttccc atggacagcg 661 taaagcaaag gt //