LOCUS BG068794 674 bp mRNA linear EST 12-MAY-2010 DEFINITION H3069D05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3069D05 3', mRNA sequence. ACCESSION BG068794 VERSION BG068794.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 674) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068794.1. Other_ESTs: H3069D05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3069 row: D column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..674 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3069D05-3" /db_xref="taxon:10090" /clone="H3069D05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 196 a 127 c 129 g 222 t ORIGIN 1 cacataaaaa taaattttta tttttaaaaa attgcttaaa tgggaccatc aaagtattta 61 acttaatctt agaggtaggg acctaaaatg ccaggtaaag gttttttaaa taagattaac 121 aggacctatc agttttcaag ttcagcttta gaacccaaat tatttcaaga tgcttttatt 181 ccagttagct cagcacgtat ccaaattctt cgttcctttg ttcacaggat caggaaaagc 241 tacccctgct gtttcaaaga cacgctgtag ctcagatcat gacctcacca gtgttaaggg 301 actcatgtgg ttggaccctc agcgccgtcc atgcctctcc ttccaggctg tggtggagaa 361 tgtgacggct tggggccatt gcctctgtct gaggacatgt ccaggaaggt ggaggaatgg 421 cactttagtc ttgtcgttta gccctatggg gcttatttac tagatataac tccctcaaaa 481 aaggtttatg aaatgctgag cctcaggttt catagacgtg tttgtacact aagaattctg 541 cagcagaata tttttaaaca ttggtttttg taagctatat ttttgtatat ttaattgcta 601 ttttaaaact ttaatgcatt ttttgctaat cacttgttta aaaataaaac atgcatgtaa 661 tcgacccaaa cgtg //